CDS

Accession Number TCMCG051C25660
gbkey CDS
Protein Id XP_024462892.1
Location complement(join(6668613..6668673,6670292..6671099,6672564..6674649))
Gene LOC7485902
GeneID 7485902
Organism Populus trichocarpa

Protein

Length 984aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024607124.1
Definition phytochrome B isoform X2 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category K
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12121        [VIEW IN KEGG]
ko:K12122        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006066        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006714        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006833        [VIEW IN EMBL-EBI]
GO:0006873        [VIEW IN EMBL-EBI]
GO:0006874        [VIEW IN EMBL-EBI]
GO:0006875        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0007623        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009645        [VIEW IN EMBL-EBI]
GO:0009649        [VIEW IN EMBL-EBI]
GO:0009687        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009753        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009867        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010029        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010148        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010202        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010244        [VIEW IN EMBL-EBI]
GO:0010374        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010617        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0015979        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0017006        [VIEW IN EMBL-EBI]
GO:0017007        [VIEW IN EMBL-EBI]
GO:0017012        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019725        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030003        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031517        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042044        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042752        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043288        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048511        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050801        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051480        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055065        [VIEW IN EMBL-EBI]
GO:0055074        [VIEW IN EMBL-EBI]
GO:0055080        [VIEW IN EMBL-EBI]
GO:0055082        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071395        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072503        [VIEW IN EMBL-EBI]
GO:0072507        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098771        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:1900140        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1902644        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1990841        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000028        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCATCACAATCACAAAGACAAAGCAACCAGCGGCAGCACCAGAATCAAGCGGCGCAGTCTTCTGGTACCAGTAACATGAGGCAACATCATCACGCCACAGAATCAGTAAGCAAAGCAATTGCACAATACACTGTCGATGCACAACTCCATGCAGTTTTTGAACAATCTGGCGGGTCTGGTAAGTCGTTTGATTATTCACAGTCAGTTAGAACTACTAGTCAGTCAGTACCCGAGGAACAAATCACTGCTTATTTATCAAAAATCCAAAGGGGTGGTCATATCCAGCCATTTGGGTGCATGATTGCTGTAGATGAAGGGTCGTTTAGGGTCATTGCATATAGCGAAAATGCCAAAGAAATGCTTGGTTTAACTCCACAGTCAGTCCCTTCTCTAGATAAACAGGAAATTCTCTCTGATGGGACTGATGTAAGGACTCTTTTTAGGCCTTCGAGCTCCGCTATGCTTGAAAAAGCATTTGGTGCAAGGGAAATAATTTTGTTGAATCCAATTTGGATCCATTCCAAGAATTCCGGGAAGCCTTTTTACGCAATTTTGCATAGGATTGATGTTGGTATTGTTATTGATTTAGAGCCTGCTAGGACTGAAGACCCTGCTTTATCCATAGCAGGGGCTGTACAGTCTCAGAAATTAGCAGTTCGTTCGATTTCACAATTACAATCACTTCCTGGTGGGGATATTAAGTTATTGTGTGATACTGTAGTGGAGAGTGTCAGAGAGCTTACCGGGTATGATAGAGTTATGGTTTATAAGTTTCATGAAGATGAGCATGGTGAGGTTGTGGCTGAGAATAAAAGGGCTGATTTGGAACCTTATATTGGTTTGCATTATCCTTCTACGGATATACCACAAGCTTCAAGGTTTTTGTTCAAGCAGAATAGGGTTAGGATGATTGTGGATTGCCATGCTACACCTGTCCGTGTTATCCAGGATGAGGCGCTTATGCAGCCTTTATGCTTGGTTGGTTCAACTCTTCGAGCTCCTCATGGTTGTCATGCTCAGTATATGGCGAATATGGGGTCAATTGCTTCATTGGCCATGGCTGTTATTATTAATGGAAATGAGGAAGAAGCTATTGGTGGGAGGAATTCAACGAGGCTTTGGGGTTTGGTTGTTTGCCATCACACTTCTGCTAGGTGTATTCCATTTCCGCTTCGTTATGCATGTGAGTTTTTAATGCAGGCTTTTGGACTTCAATTGAACATGGAATTGCAGTTAGCGTCACAGTTGTCAGAGAAACATGTCTTGAGGACTCAGACTCTCTTGTGTGATATGCTTCTCCGTGACTCTCCTACTGGCATTGTCACTCAAAGTCCCAGTATCATGGATCTTGTGAAGTGTGACGGGGCAGCTCTTTATTACCAAGGACAGTATTATCCATTGGGCGTGACCCCAACCGAAGCCCAAATAAAAGATATTGTGGAGTGGTTGTTGGCCCTTCACGGAGACTCAACTGGTTTAAGCACAGACAGTTTAGCTGATGCTGGGTATCCTGGGGCAGCCTCACTTGGCAATGCAGTTTGTGGAATGGCTGTTGCTTATATTACTAAGAGAGATTTTCTTTTCTGGTTTCGGTCTCACACTGCAAAGGAGATCAAATGGGGTGGTGCGAAGCATCACCCAGAGGACAAGGATGATGGGCAGAGGATGCATCCACGTTCTTCATTCAAGGCATTTTTGGAGGTGGTGAAGAGCCGGAGTTTACTGTGGGAGAATGCAGAAATGGATGCCATTCATTCTTTGCAGCTTATTTTGCGAGACTCATTTAGGGACGTTGAAGCAACCAATTCTAAGGCAGTTGTACATGCCCAGCTCGAGGATACAGAATTGCAAGGGATGGATGAGCTCAGTTCGGTCGCAAGAGAAATGGTGAGACTAATAGAGACTGCAACTGCTCCGATATTTGCTGTAGATGTTGATGGCTGCATAAATGGGTGGAATGCAAAGGTCGCTGAGTTGACTGGGCTCTCAGTTGACAAGGCCATGGGGAAGTCTTTGGTTCACGATCTTGTTTATAAGGAATATGAAGAAACAGTTGACAAACTCCTTCATCGTGCTTTAAGAGGTGAGGAGGATAAGAACGTGGAGATAAAATTGAGGACATTTGGCTCTGAACACCAAAAAAAGGCCCTTTTTGTGGTGGTAAATGCTTGTTCTAGCAAGGATTACATGAATAATATAGTTGGAGTCTGCTTTGTCGGTCAGGATGTTACAGGTCAAAAGGTGGTAATGGACAAATATGTCCATATACAAGGTGATTATAAGGCTATTGTACACAGCCCCAATCCTTTGATCCCTCCTATATTTGCTTCAGATGAAAACACATGTTGCTTGGAGTGGAACACTGCCATGGAAAAATTCACGGGGTGGTCCCGGGGGGAAGTTATTGGGAAGATGTTGGTTGGGGAGGTTTTTGGCAGTTGCTGTCAGCTCAAGGGTTCAGATGCACTGACAAAATTCATGATTGCTCTGCACAATGCAATTGGAGGGCAAGATACAGACAAGCTACCATTTTCATTTTTTGACCGGAATGGAAAGTATGTGCAAGCTCTCTTGACAGCGAACAAGAGGGTAAATATGGAGGGAGAGATTGTTGGAGCCTTCTGCTTCTTGCAGATTGCAAGTAATGAGTTGCAGCAAGCTTTGAAAGTCCAGAGACAGCAGGAAAAGAAGTGCTCTGCAAGGATGAAAGAGTTGGCTTACATCTGCCAGGAAATAAGGAATCCTTTAAGCGGTCTACGCTTTACCAACTCGCTTTTGGAGAACACGGACTTGACTGAAGATCAAAAGCAGTTTCTTGAGACTAGTGCTGCTTGTGAAAAGCAGATATTGAAGATCACTCGAGATGTTGATCTTGAGAGCATCGAAAATGGCAGACATATCCTAACGAGAGGGTGTCTCCATTTGCTTTTGAATAAGTTTACTGGAGCTTGA
Protein:  
MASQSQRQSNQRQHQNQAAQSSGTSNMRQHHHATESVSKAIAQYTVDAQLHAVFEQSGGSGKSFDYSQSVRTTSQSVPEEQITAYLSKIQRGGHIQPFGCMIAVDEGSFRVIAYSENAKEMLGLTPQSVPSLDKQEILSDGTDVRTLFRPSSSAMLEKAFGAREIILLNPIWIHSKNSGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRSISQLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVAENKRADLEPYIGLHYPSTDIPQASRFLFKQNRVRMIVDCHATPVRVIQDEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNEEEAIGGRNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVEWLLALHGDSTGLSTDSLADAGYPGAASLGNAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLLWENAEMDAIHSLQLILRDSFRDVEATNSKAVVHAQLEDTELQGMDELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVDKAMGKSLVHDLVYKEYEETVDKLLHRALRGEEDKNVEIKLRTFGSEHQKKALFVVVNACSSKDYMNNIVGVCFVGQDVTGQKVVMDKYVHIQGDYKAIVHSPNPLIPPIFASDENTCCLEWNTAMEKFTGWSRGEVIGKMLVGEVFGSCCQLKGSDALTKFMIALHNAIGGQDTDKLPFSFFDRNGKYVQALLTANKRVNMEGEIVGAFCFLQIASNELQQALKVQRQQEKKCSARMKELAYICQEIRNPLSGLRFTNSLLENTDLTEDQKQFLETSAACEKQILKITRDVDLESIENGRHILTRGCLHLLLNKFTGA